News

Journal Club (JC#4)

Talk by Noémie Bossut about paper “Supporting Better Insights of Data Science Pipelines with Fine-grained Provenance” (Chapman A. et al.)

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Sep 11, 2024 Journal_Club

Paper accepted at eScience 2024

Paper on ‘Reproducibility in Named Entity Recognition: A Case Study Analysis’ got accepted at eScience 2024

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Aug 27, 2024 Publications

Paper accepted at NAR Genomics and Bioinformatics

Paper ‘BioFlow-Insight: facilitating reuse of Nextflow workflows with structure reconstruction and visualization’ got accepted at NAR Genomics and Bioinformatics

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Aug 27, 2024 Publications

Poster at JEP TALN RECITAL 2024 (Toulouse)

Poster “Extraction d’entités nommées décrivant des chaînes de traitement bioinformatiques dans des articles scientiﬁques en anglais” by Clémence Sebe

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Jul 12, 2024 Conférence

Journal Club (JC#3)

Talk by Melvin Atay about paper ‘Variability in the analysis of a single neuroimaging dataset by many teams’ (Botvinik-Nezer R et al.)

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Jul 4, 2024 Journal_Club

Poster at ACM Conference on Reproducibility and Replicability REP 2024 (Rennes)

Poster “BioFlow-Insight - Leveraging Graph representations to Facilitate the Reuse of Bioinformatics Workflows” by George Marchment

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Jun 19, 2024 Symposium

Poster au 6e Symposium du GdR MaDICS (Blois)

Présentation du Poster “From Headache to Hight-Five! We are trying to make reproductibility in Bioinformatics easier” par Noémie Bossut.

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May 29, 2024 Symposium

Journal Club (JC#2)

Talk done by Clémence Sebe about paper “Bioinformatic Workflow Extraction from Scientific Texts based on Word Sense Disambiguation” (Halioui A. et al.)

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May 22, 2024 Journal_Club

Journal Club (JC#1)

Talk done by George Marchment about paper “Identifying and Overcoming Threats to Reproducibility, Replicability, Robustness, and Generalizability in Microbiome Research” (Patrick D. Schloss).

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Apr 3, 2024 Journal_Club

Organisation du premier reprokathon du projet.

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Feb 18, 2024 Hakathon